mirror of
https://github.com/c-sooyoung/fold_slice.git
synced 2026-09-18 01:59:11 +09:00
81 lines
2.2 KiB
Matlab
81 lines
2.2 KiB
Matlab
close all
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addpath(fullfile(pwd,'utils'))
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%%
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figure1 = figure('Color',[1 1 1],'OuterPosition',[100 100 1800 600]);
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%set(gcf,'Outerposition',[100 100 1800 600])
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clf()
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%set(gca,'color','white')
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scale = p.dx_spec;
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%object_roi = object(p.object_ROI{:},:);
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aobject = angle(object);
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range = sp_quantile(angle(object_roi), [1e-3, 1-1e-3],10);
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aobject = (aobject - range(1)) / (range(2) - range(1));
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Np_o = size(object);
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grids = {(-ceil(Np_o(2)/2):ceil(Np_o(2)/2)-1)*scale(2), ...
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(-ceil(Np_o(1)/2):ceil(Np_o(1)/2)-1)*scale(1)};
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imagesc(grids{:}, aobject, [-2, 1]); % reduce contrast
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colormap bone
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axis xy
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hold on
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pos = outputs.probe_positions;
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pos_0 = outputs.probe_positions_0;
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%pos = pos + Np_o([2,1])/2;
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%pos_scales = (pos-Np_o([2,1])/2) .* scale([2,1]);
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pos_scales = pos .* scale([2,1]);
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pos_scales_0 = pos_0 .* scale([2,1]);
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%mean_err = mean(std(pos_err));
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%range = max(pos) - min(pos);
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%up = 0.02 * min(range) / mean_err;
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%rounding_order = 10^floor(log10(up));
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%up = ceil(up / rounding_order)*rounding_order;
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scatter( pos_scales(:,1), pos_scales(:,2),'.r')
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scatter( pos_scales_0(:,1), pos_scales_0(:,2),10, '.','MarkerEdgeColor','b')
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%hold off
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axis equal xy tight
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range = [min(pos_scales(:,1)), max(pos_scales(:,1)), min(pos_scales(:,2)), max(pos_scales(:,2))];
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axis(range)
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title(['\fontsize{16}{\color{blue}initial positions, '...
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'\color{red}refined positions}'])
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%title('Initial positions: blue. Refined positions: red. Current probe position: Black')
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%ylabel('Position [\mum]') %for x-ray
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%xlabel('Position [\mum]')
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ylabel('Position [A]') %for electron
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xlabel('Position [A]')
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%%
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close all
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figure
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subplot(2,2,1)
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plot(outputs.relative_pixel_scale,'.','MarkerSize',4)
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axis tight
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ylabel('Relative pixel scaling correction [-]')
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xlabel('Iteration')
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title('Scales')
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hold off
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grid on
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subplot(2,2,2)
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plot(outputs.asymmetry*100,'.','MarkerSize',4)
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axis tight
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ylabel('Asymmetry [%]')
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xlabel('Iteration')
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title('Asymmetry')
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grid on
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subplot(2,2,3)
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plot(outputs.rotation,'.','MarkerSize',4)
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axis tight
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ylabel('Rotation [deg]')
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xlabel('Iteration')
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title('Rotation')
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grid on
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subplot(2,2,4)
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plot(outputs.shear,'.','MarkerSize',4)
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axis tight
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ylabel('Shear [deg]')
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xlabel('Iteration')
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title('Shear')
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grid on |