moved notebooks from bo-ptycho to here

mat-preview/260816.ipynb

@@ -0,0 +1,121 @@
+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "id": "5c8aa3fd",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "from scipy.io import loadmat as scipy_loadmat\n",
+    "from mat73 import loadmat as mat73_loadmat\n",
+    "import numpy as np"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "4a419040",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "['outputs', 'probe', 'object', 'p']"
+      ]
+     },
+     "execution_count": 17,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "# fold_slice output\n",
+    "f = \"/home/swim/shared/Si_project/Si8V2_full/roi1_Ndp256/MLs_L1_p1_g64_Ndp192_pc1_noModel_Ns23_dz14.6087_reg0.2/Niter1000.mat\"\n",
+    "contents = scipy_loadmat(f)\n",
+    "print([key for key in contents.keys() if not key.startswith('__')])"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 27,
+   "id": "8a7b58b2",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "mappingproxy({'reconstruct_ind': (dtype('O'), 0),\n",
+       "              'background': (dtype('O'), 8),\n",
+       "              'intensity_corr': (dtype('O'), 16),\n",
+       "              'probe_fourier_shift': (dtype('O'), 24),\n",
+       "              'rotation': (dtype('O'), 32),\n",
+       "              'shear': (dtype('O'), 40),\n",
+       "              'relative_pixel_scale': (dtype('O'), 48),\n",
+       "              'diffraction_deform_matrix': (dtype('O'), 56),\n",
+       "              'pixel_size': (dtype('O'), 64),\n",
+       "              'Np_p': (dtype('O'), 72),\n",
+       "              'probe': (dtype('O'), 80),\n",
+       "              'probe_support': (dtype('O'), 88),\n",
+       "              'probe_support_fft': (dtype('O'), 96),\n",
+       "              'object': (dtype('O'), 104),\n",
+       "              'probe_positions_0': (dtype('O'), 112),\n",
+       "              'probe_positions': (dtype('O'), 120),\n",
+       "              'Np_o': (dtype('O'), 128),\n",
+       "              'Npos': (dtype('O'), 136),\n",
+       "              'affine_matrix': (dtype('O'), 144),\n",
+       "              'noise': (dtype('O'), 152),\n",
+       "              'diffraction': (dtype('O'), 160),\n",
+       "              'mask': (dtype('O'), 168),\n",
+       "              'filename': (dtype('O'), 176),\n",
+       "              'path': (dtype('O'), 184),\n",
+       "              'z_distance': (dtype('O'), 192),\n",
+       "              'lambda': (dtype('O'), 200),\n",
+       "              'diff_pattern_blur': (dtype('O'), 208),\n",
+       "              'modes': (dtype('O'), 216),\n",
+       "              'probe_evolution': (dtype('O'), 224),\n",
+       "              'affine_matrix_fit': (dtype('O'), 232),\n",
+       "              'fourier_error_out': (dtype('O'), 240),\n",
+       "              'fourier_error_dp': (dtype('O'), 248),\n",
+       "              'probe_positions_model': (dtype('O'), 256),\n",
+       "              'affine_matrix_init': (dtype('O'), 264),\n",
+       "              'probe_positions_weight': (dtype('O'), 272),\n",
+       "              'detector_rotation': (dtype('O'), 280),\n",
+       "              'detector_scale': (dtype('O'), 288),\n",
+       "              'asymmetry': (dtype('O'), 296),\n",
+       "              'avgTimePerIter': (dtype('O'), 304),\n",
+       "              'fourier_error_threshold': (dtype('O'), 312)})"
+      ]
+     },
+     "execution_count": 27,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "contents['outputs'].dtype.fields"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "lemon",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.12.12"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}