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69 lines
1.9 KiB
Matlab
69 lines
1.9 KiB
Matlab
% LOAD_PROJECTIONS_NUM_APS load reconstructed projections numbers
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% created by YJ based on PSI's function
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% Only read scan numbers, usedful for debugging
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% Inputs:
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% **par - parameter structure
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% **exclude_scans - list of scans to be excluded from loading, [] = none
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% **theta - angles of the scans
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function [scanstomo] = load_projections_num_aps(par, exclude_scans, theta)
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import ptycho.*
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import utils.*
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import io.*
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import plotting.*
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scanstomo = par.scanstomo;
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% avoid loading scans listed in 'exclude_scans'
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if ~isempty(exclude_scans)
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ind = ismember(scanstomo, exclude_scans);
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scanstomo(ind) = [];
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theta(ind) = [];
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end
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verbose(1,'Checking available files')
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missing_scans = [];
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proj_file_names = {};
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proj_recon_method = {};
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proj_roi = {};
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proj_scanNo = {};
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for num = 1:length(scanstomo)
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progressbar(num, length(scanstomo))
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%proj_file_names{num} = find_ptycho_filename(par.analysis_path,scanstomo(num),par.fileprefix,par.filesuffix, par.file_extension);
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%proj_file_names{num} = find_projection_files_names_aps(par, scanstomo(num));
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[proj_file_names{num},proj_recon_method{num},proj_roi{num},proj_scanNo{num}] = find_ML_recon_files_names(par, scanstomo(num));
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%disp(proj_file_names{num})
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if isempty(proj_file_names{num})
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missing_scans(end+1) = scanstomo(num);
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end
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end
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verbose(par.verbose_level); % return to original settings
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if ~isempty(missing_scans)
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ind = ismember(scanstomo, missing_scans);
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verbose(1,['Scans not found are ' num2str(missing_scans)])
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verbose(1,['Projections not found are ' num2str(find(ind))])
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scanstomo(ind) = [];
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theta(ind) = [];
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proj_file_names(ind) = [];
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proj_recon_method(ind) = [];
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proj_roi(ind) = [];
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proj_scanNo(ind) = [];
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else
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verbose(1,'All projections found')
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end
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num_proj = length(scanstomo);
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tic
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if num_proj == 0
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verbose(0, 'No new projections loaded')
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return
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end
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end
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