% PROP_TILTED_PLANE Near field propagation into a surface tilted with respect to the beam % % [u_1, H, h_tilted] = prop_free_tilted_plane(u_0, z, lambda, pixel_size, ax=1) % returns the propagated wavefield % Inputs: % **u_0 stack of images % **rotation [alpha, beta] - along first, second axis [deg] % **lambda wavelenght [m] % **pixel_size pixel size [m] - in the rotated coordinates, ie. pixel size can be anisotropic % *returns* % ++u_1 propagated stack of images % % see utils.prop_free_tilted_plane for more details %*-----------------------------------------------------------------------* %|                                                                       | %|  Except where otherwise noted, this work is licensed under a          | %|  Creative Commons Attribution-NonCommercial-ShareAlike 4.0            | %|  International (CC BY-NC-SA 4.0) license.                             | %|                                                                       | %|  Copyright (c) 2017 by Paul Scherrer Institute (http://www.psi.ch)    | %|                                                                       | %|      Author: CXS group, PSI  | %*-----------------------------------------------------------------------* % You may use this code with the following provisions: % % If the code is fully or partially redistributed, or rewritten in another % computing language this notice should be included in the redistribution. % % If this code, or subfunctions or parts of it, is used for research in a % publication or if it is fully or partially rewritten for another % computing language the authors and institution should be acknowledged % in written form in the publication: “Data processing was carried out % using the “cSAXS matlab package” developed by the CXS group, % Paul Scherrer Institut, Switzerland.” % Variations on the latter text can be incorporated upon discussion with % the CXS group if needed to more specifically reflect the use of the package % for the published work. % % A publication that focuses on describing features, or parameters, that % are already existing in the code should be first discussed with the % authors. % % This code and subroutines are part of a continuous development, they % are provided “as they are” without guarantees or liability on part % of PSI or the authors. It is the user responsibility to ensure its % proper use and the correctness of the results. function [fwd_propag, back_propag] = get_tilted_plane_propagators(img_sample, rotation, lambda, pixel_size) %% nearfield propagator into tilted plane import utils.* fwd_propag = @(x)x; back_propag = @(x)x; if all(rotation == 0) return end Npix = size(img_sample); if any(rotation(1:2)~= 0 ) % provide tilt of the sample assert(sum(rotation(1:2)~=0) < 2, 'Only rotation along one axis is supported') ax = find(rotation(1:2)~=0); % propagation distance for each row / column to reach the tilted plane % extend * cosd(alpha) * tand(alpha) grid = ((-Npix(ax)/2+1):Npix(ax)/2)*pixel_size(min(ax,end)) * sind(rotation(ax)); [~, H, h_tilted] = prop_free_nonparallel_plane(zeros(Npix(1:2), 'like', img_sample), grid, lambda, pixel_size, ax); % precalculate conjuged and transposed matrices H_t = H.'*1; % enforce copy Hc = conj(H); Hc_t = Hc.'*1; h_tilted_t = h_tilted'*1; % enforce copy %%%%%%%%%%%%%% propagate the image, see utils.prop_free_tilted_plane for more details %%%%%%%%%%%%%%%%%%%%% if ax == 1 fwd_propag = @(x)(utils.mtimes_stack(h_tilted,ifft(H_t .* fft(x,[],2),[],2))); back_propag = @(x)(ifft(Hc_t.*fft(utils.mtimes_stack(h_tilted_t,x),[],2),[],2)); else fwd_propag = @(x)(utils.mtimes_stack(ifft(H .* fft(x,[],1),[],1),h_tilted)); back_propag = @(x)(ifft(Hc.*fft(utils.mtimes_stack(x,h_tilted_t),[],1),[],1)); end end if rotation(3)~= 0 % rotate image around beam axis fwd_propag = @(x)fwd_propag(utils.imrotate_ax_fft(x, rotation(3), 3)); back_propag = @(x)back_propag(utils.imrotate_ax_fft(x, -rotation(3), 3)); end end