%HDF5_DSET_EXISTS check if dataset exists in given file % file... h5 file path % dset... dataset name % % *optional* % gpath... path within the h5 file; default root (/) % check_links... include links; default true % % EXAMPLES: % out = io.HDF.hdf5_dset_exists('./recons.h5', % 'object_phase_unwrapped', '/reconstruction', true); % %*-----------------------------------------------------------------------* %|                                                                       | %|  Except where otherwise noted, this work is licensed under a          | %|  Creative Commons Attribution-NonCommercial-ShareAlike 4.0            | %|  International (CC BY-NC-SA 4.0) license.                             | %|                                                                       | %|  Copyright (c) 2017 by Paul Scherrer Institute (http://www.psi.ch)    | %|                                                                       | %|      Author: CXS group, PSI  | %*-----------------------------------------------------------------------* % You may use this code with the following provisions: % % If the code is fully or partially redistributed, or rewritten in another % computing language this notice should be included in the redistribution. % % If this code, or subfunctions or parts of it, is used for research in a % publication or if it is fully or partially rewritten for another % computing language the authors and institution should be acknowledged % in written form in the publication: “Data processing was carried out % using the “cSAXS matlab package” developed by the CXS group, % Paul Scherrer Institut, Switzerland.” % Variations on the latter text can be incorporated upon discussion with % the CXS group if needed to more specifically reflect the use of the package % for the published work. % % A publication that focuses on describing features, or parameters, that % are already existing in the code should be first discussed with the % authors. % % This code and subroutines are part of a continuous development, they % are provided “as they are” without guarantees or liability on part % of PSI or the authors. It is the user responsibility to ensure its % proper use and the correctness of the results. function [out] = hdf5_dset_exists(file, dset, varargin) out = false; % load info if nargin > 2 h = h5info(file, varargin{1}); else h = h5info(file); end if nargin > 3 check_links = varargin{2}; else check_links = true; end if nargin > 4 check_groups = varargin{3}; else check_groups = true; end % loop through datasets and check if name exists for ii=1:numel(h.Datasets) if strcmpi(h.Datasets(ii).Name, dset) out = true; break end end if check_links for ii=1:numel(h.Links) if strcmpi(h.Links(ii).Name, dset) out = true; break end end end if check_groups for ii=1:numel(h.Groups) [~, gname] = fileparts(h.Groups(ii).Name); if strcmpi(gname, dset) out = true; break end end end end