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% IMSHIFT_CIRC_AX will apply integer shift that can be different
% for each frame along axis AX. The shift is applied with !! periodic
% boundary !!.
%
% img_out = imshift_circ_ax(img, shift, ax)
%
% Inputs:
% **img - stack of images
% **shift - horizontal / vertical shift in pixels , N*2 vector
% **ax - axis along which the stacked images will be shifted
% *returns*:
% ++img - shifted image
%*-----------------------------------------------------------------------*
%|                                                                       |
%|  Except where otherwise noted, this work is licensed under a          |
%|  Creative Commons Attribution-NonCommercial-ShareAlike 4.0            |
%|  International (CC BY-NC-SA 4.0) license.                             |
%|                                                                       |
%|  Copyright (c) 2017 by Paul Scherrer Institute (http://www.psi.ch)    |
%|                                                                       |
%|      Author: CXS group, PSI  |
%*-----------------------------------------------------------------------*
% You may use this code with the following provisions:
%
% If the code is fully or partially redistributed, or rewritten in another
% computing language this notice should be included in the redistribution.
%
% If this code, or subfunctions or parts of it, is used for research in a
% publication or if it is fully or partially rewritten for another
% computing language the authors and institution should be acknowledged
% in written form in the publication: Data processing was carried out
% using the cSAXS matlab package developed by the CXS group,
% Paul Scherrer Institut, Switzerland.
% Variations on the latter text can be incorporated upon discussion with
% the CXS group if needed to more specifically reflect the use of the package
% for the published work.
%
% A publication that focuses on describing features, or parameters, that
% are already existing in the code should be first discussed with the
% authors.
%
% This code and subroutines are part of a continuous development, they
% are provided as they are without guarantees or liability on part
% of PSI or the authors. It is the user responsibility to ensure its
% proper use and the correctness of the results.
function img_out = imshift_circ_ax(img, shift, ax)
shift = round(shift);
if all(shift == 0)
img_out=img;
return
end
Npix = size(img);
img_out = img;
ind = {':',':',':'}; % assume max 3 dim
ax_0 = 1+mod(ax,ndims(img)); % fixed axis
for i = 1:Npix(ax_0)
ind{ax_0} = i;
img_out(ind{:}) = circshift(img(ind{:}), shift(i), ax);
end
end