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%[default_value] = default_parameter_value(mfile_name,parameter_name,vararg)
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% identify the current system to set useful default parameters
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% Filename: $RCSfile: default_parameter_value.m,v $
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%
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% $Revision: 1.10 $ $Date: 2011/08/13 14:10:58 $
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% $Author: $
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% $Tag: $
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%
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% Description:
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% identify the current system to set useful default parameters
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%
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% Note:
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% none
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%
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% Dependencies:
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% none
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%
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%
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% history:
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%
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% April 28th 2010:
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% add plot_radial_integ, find_files, radial_integ
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%
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% April 2009: 1st version
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%*-----------------------------------------------------------------------*
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%| |
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%| Except where otherwise noted, this work is licensed under a |
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%| Creative Commons Attribution-NonCommercial-ShareAlike 4.0 |
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%| International (CC BY-NC-SA 4.0) license. |
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%| |
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%| Copyright (c) 2017 by Paul Scherrer Institute (http://www.psi.ch) |
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%| |
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%| Author: CXS group, PSI |
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%*-----------------------------------------------------------------------*
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% You may use this code with the following provisions:
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%
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% If the code is fully or partially redistributed, or rewritten in another
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% computing language this notice should be included in the redistribution.
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%
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% If this code, or subfunctions or parts of it, is used for research in a
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% publication or if it is fully or partially rewritten for another
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% computing language the authors and institution should be acknowledged
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% in written form in the publication: “Data processing was carried out
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% using the “cSAXS matlab package” developed by the CXS group,
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% Paul Scherrer Institut, Switzerland.”
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% Variations on the latter text can be incorporated upon discussion with
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% the CXS group if needed to more specifically reflect the use of the package
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% for the published work.
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%
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% A publication that focuses on describing features, or parameters, that
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% are already existing in the code should be first discussed with the
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% authors.
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%
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% This code and subroutines are part of a continuous development, they
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% are provided “as they are” without guarantees or liability on part
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% of PSI or the authors. It is the user responsibility to ensure its
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% proper use and the correctness of the results.
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function [default_value] = ...
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default_parameter_value(mfile_name,parameter_name,vararg)
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import utils.identify_system
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sys_id = identify_system();
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% disable the use of the find command for non Unix/Linux based systems
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if (strcmp(parameter_name,'UseFind'))
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if (strcmp(sys_id,'Windows'))
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default_value = 0;
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else
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default_value = 1;
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end
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end
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switch mfile_name
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case 'image_show'
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switch parameter_name
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case 'FigNo'
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default_value = 1;
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case 'FigClear'
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default_value = 1;
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case 'ImageHandle'
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default_value = 0;
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case 'AutoScale'
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switch sys_id
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case {'DPC lab', 'mDPC lab', 'cSAXS-mobile'}
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default_value = [1 1];
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otherwise
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default_value = [0 0];
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end
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case 'AxisMin'
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default_value = 1;
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case 'AxisMax'
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default_value = 1e5;
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case 'HistScale'
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default_value = [ 0.15 0.85 ];
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case 'LogScale'
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switch sys_id
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case {'DPC lab', 'mDPC lab', 'cSAXS-mobile'}
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default_value = 0;
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otherwise
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default_value = 1;
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end
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case 'XScale'
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default_value = 1.0;
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case 'YScale'
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default_value = 1.0;
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case 'XOffs'
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default_value = 0.0;
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case 'ColorBar'
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default_value = 1;
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case 'ColorMap'
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default_value = [];
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case 'Axes'
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default_value = 1;
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case 'DisplayTime'
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default_value = 1;
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case 'DisplayFtime'
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default_value = 1;
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case 'DisplayExptime'
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default_value = 1;
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case 'BgrData'
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default_value = [];
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case 'FrameNumber'
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default_value = 0;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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case 'image_read'
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switch parameter_name
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case 'OrientByExtension'
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switch sys_id
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case 'mDPC lab'
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default_value = 0;
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otherwise
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default_value = 1;
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end
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case 'DataType'
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default_value = 'double';
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case 'ForceFileType'
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default_value = [];
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case 'MatlabVar'
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default_value = 'data';
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case 'RowFrom'
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default_value = 0;
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case 'RowTo'
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default_value = 0;
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case 'ColumnFrom'
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default_value = 0;
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case 'ColumnTo'
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default_value = 0;
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case 'UnhandledParError'
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default_value = 1;
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case 'IsFmask'
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default_value = true;
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case 'DisplayFilename'
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default_value = 1;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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case 'image_orient'
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switch parameter_name
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case 'Transpose'
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default_value = 0;
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case 'FlipLR'
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switch sys_id
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case 'mDPC lab'
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default_value = 1;
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otherwise
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default_value = 0;
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end
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case 'FlipUD'
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default_value = 0;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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case 'plot_radial_integ'
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switch parameter_name
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case 'FigNo'
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% figure number for plotting the integrated data
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default_value = 100;
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case 'NewFig'
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% no new figure for each plot
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default_value = 0;
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case 'ClearFig'
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% clear figure before plotting
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default_value = 1;
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case 'Axis'
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% auto scaling
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default_value = [];
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case 'SleepTime'
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% no sleep after each plot
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default_value = 0.0;
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case 'XLog'
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% linear scaling of the x-axis
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default_value = 0;
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case 'YLog'
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% logarithmic scaling of the y-axis
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default_value = 1;
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case 'PlotQ'
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% plot as a function of q rather than pixel number
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default_value = 0;
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case 'PlotAngle'
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% plot as a function of the azimuthal angle rather than q or radius
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default_value = 0;
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case 'RadiusRange'
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% average over this range in radius for the azimuthal plot
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default_value = [];
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case 'FilenameIntegMasks'
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% location of the integration masks, needed for normalization in case of
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% averaging over radii
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default_value = '~/Data10/analysis/data/pilatus_integration_masks.mat';
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case 'PixelSize_mm'
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% pixel size for q calculation
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default_value = [];
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case 'DetDist_mm'
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% detector distance for q calculation
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default_value = [];
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case 'E_keV'
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% x-ray energy for q calculation
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default_value = [];
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% plot in inverse nm rather than inverse Angstroem
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case 'Inverse_nm'
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default_value = 0;
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case 'QMulPow'
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% do not multiply by q to the power of this value
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default_value = [];
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case 'SegAvg'
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% average over segments
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default_value = 1;
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case 'SegRange'
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% segment range
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default_value = [];
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case 'LegendMulSeg'
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% legend in case of multi segment plots
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default_value = 1;
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case 'PointAvg'
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% plot the average over one Matlab file which is typically a scan line
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default_value = 1;
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case 'PointRange'
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% point range
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default_value = [];
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case 'BgrFilename'
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% background to subtract
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default_value = '';
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case 'BgrScale'
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% scaling factor for background data
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default_value = 1.0;
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case 'BgrPoint'
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% point within the background file to subtract
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default_value = 1;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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case 'find_files'
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switch parameter_name
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case 'UseFind'
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% the default is set above system dependent
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case 'UnhandledParError'
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% exit with an error message if unhandled named parameters are left at the
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% end of this macro
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default_value = 1;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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case 'radial_integ'
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switch parameter_name
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case 'OutdirData'
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% output directory for integrated intensities
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default_value = '~/Data10/analysis/radial_integration/';
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case 'FilenameIntegMasks'
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% location of the integration masks
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default_value = '~/Data10/analysis/data/pilatus_integration_masks.mat';
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case 'rMaxForced'
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% use the full range of integration masks
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default_value = 0;
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case 'FigNo'
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% do not plot integrated data
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default_value = 0;
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case 'SaveCombinedI'
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% combine integrated intensities from all files within one directory
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default_value = 1;
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case 'Recursive'
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% recursively integrate data from all sub directories
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default_value = 1;
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case 'ParTasksMax'
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% use parallel processing by default if the toolbox is
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% available
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[dummy, other_system_flags] = identify_system();
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default_value = 1;
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if (other_system_flags.parallel_computing_toolbox_available)
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default_value = 256;
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end
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case 'UseFind'
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% the default value is set above
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case 'UnhandledParError'
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% exit with an error message if unhandled named parameters are left at the
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% end of this macro
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default_value = 1;
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otherwise
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error('Unknown parameter name %s for m-file %s',...
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parameter_name,mfile_name);
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end
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otherwise
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error('No default parameters set for m-file %s (parameter name %s)',...
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mfile_name,parameter_name);
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end
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