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2026-09-17 19:39:08 +09:00 · 2026-08-07 15:56:42 +09:00
commit 91ad25aca9
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+import io.image_read
+
+% this script is used to plot the sgalil positions in the order that they
+% occur
+clear
+scan_init=11103;
+number_of_scans=10;
+%% 
+%pos_arrayx=zeros(pts_per_scan+1,number_of_scans);
+%pos_arrayy=zeros(pts_per_scan+1,number_of_scans);
+figure
+pos_arrayx = [];
+pos_arrayy = [];
+for jj=1:number_of_scans
+this_scan=scan_init+jj-1;
+filename = sprintf('~/Data10/sgalil/S%05d.dat',this_scan);
+
+data = beamline.read_position_file(filename);
+x = data.Avg_x;
+y = data.Avg_y;
+
+pos_arrayx = [pos_arrayx; x];
+pos_arrayy = [pos_arrayy; y];
+end
+%%
+figure (1)
+for i= 1:numel(pos_arrayx)
+    plot(pos_arrayx(i),pos_arrayy(i),'-bo')
+    axis equal
+    grid on
+    hold on
+    pause(0.1)
+    title(sprintf('S%05d - S%05d',scan_init,scan_init+number_of_scans))
+end
+hold off
+
+
+fprintf('**************************************************************************** \n');
+fprintf('The mean step size is %.05f microns \n', mean(abs(diff(y(:, 1))))*1000);
+fprintf('The standard deviation is is %.05f microns \n', std(abs(diff(y(:, 1))))*1000);
+
+
+%*-----------------------------------------------------------------------*
+%|                                                                       |
+%|  Except where otherwise noted, this work is licensed under a          |
+%|  Creative Commons Attribution-NonCommercial-ShareAlike 4.0            |
+%|  International (CC BY-NC-SA 4.0) license.                             |
+%|                                                                       |
+%|  Copyright (c) 2017 by Paul Scherrer Institute (http://www.psi.ch)    |
+%|                                                                       |
+%|       Author: CXS group, PSI                                          |
+%*-----------------------------------------------------------------------*
+%
+% You may use this code with the following provisions:
+%
+% If the code is fully or partially redistributed, or rewritten in another
+%   computing la this notice should be included in the redistribution.
+%
+% If this code, or subfunctions or parts of it, is used for research in a 
+%   publication or if it is fully or partially rewritten for another 
+%   computing language the authors and institution should be acknowledged 
+%   in written form in the publication: “Data processing was carried out 
+%   using the “cSAXS scanning SAXS package” developed by the CXS group,
+%   Paul Scherrer Institut, Switzerland.” 
+%   Variations on the latter text can be incorporated upon discussion with 
+%   the CXS group if needed to more specifically reflect the use of the package 
+%   for the published work.
+%
+% Additionally, any publication using the package, or any translation of the 
+%     code into another computing language should cite:
+%    O. Bunk, M. Bech, T. H. Jensen, R. Feidenhans'l, T. Binderup, A. Menzel 
+%    and F Pfeiffer, “Multimodal x-ray scatter imaging,” New J. Phys. 11,
+%    123016 (2009). (doi: 10.1088/1367-2630/11/12/123016)
+%
+% A publication that focuses on describing features, or parameters, that
+%    are already existing in the code should be first discussed with the
+%    authors.
+%   
+% This code and subroutines are part of a continuous development, they 
+%    are provided “as they are” without guarantees or liability on part
+%    of PSI or the authors. It is the user responsibility to ensure its 
+%    proper use and the correctness of the results.
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%