import os import sys import yaml import shutil import numpy as np import bo import ptycho def main(config_yaml): with open(config_yaml, 'r') as f: config = yaml.safe_load(f) result_dir = config['io']['result_dir'] os.makedirs(result_dir, exist_ok=True) shutil.copy(config_yaml, os.path.join(result_dir, os.path.basename(config_yaml))) # RANDOM BO SAMPLING PREPARATIONS; 20 SAMPLES J = 20 randombo = bo.RandomBOEngine(config) bo_txt = os.path.join(result_dir, "bo.txt") with open(bo_txt, "w") as f: f.write(f" iter\tmetric\t{"\t".join([p[:7] for p in randombo.params])}\n") for j in range(J): print(f"RANDOM sampling iteration {j}") job_config = randombo.ask() ptycho_engine = ptycho.FoldSlicePtychoEngine(job_config) ptycho_engine.run(run_id=f"bo-{j:03d}") y_value = ptycho_engine._metric randombo.tell(job_config, y_value) with open(bo_txt, "a") as f: p = [f'{job_config['ptycho']['params'][key]:.2f}' for key in randombo.params] f.write(f"{j: 8d}\t{y_value:.4f}\t{"\t".join(p)}\n") # MAIN SINGLE OBJECTIVE BAYESIAN OPTIMIZATION sobo = bo.SingleObjectiveBOEngine(config) sobo.train_x = randombo.train_x sobo.train_y = randombo.train_y for j in range(J, J + config['bo']['max_iterations'] + 1): print(f"SOBO sampling iteration {j}") job_config = sobo.ask() ptycho_engine = ptycho.FoldSlicePtychoEngine(job_config) ptycho_engine.run(run_id=f"bo-{j:03d}") y_value = ptycho_engine._metric sobo.tell(job_config, y_value) with open(bo_txt, "a") as f: p = [f'{job_config['ptycho']['params'][key]:.2f}' for key in sobo.params] f.write(f"{j: 8d}\t{y_value:.4f}\t{"\t".join(p)}\n") if __name__ == "__main__": if len(sys.argv) != 2: print("Usage: python bo-ptycho.py ") sys.exit(1) config_yaml = sys.argv[1] main(config_yaml)